If you were following actual science during the alternative energy debate of the 1990s and early 2000s, you were probably concerned about the irrational zeal of activists and politicians like Al Gore who wanted to embrace anything that meant fewer fossil fuels - specifically, ethanol.

Billions of dollars in subsidies since 2005 and mandates on its usage have shown us that ethanol was wrong all along.  And it is apparently only beginning to be realized how wrong.

Even more of the fertilizers and pesticides used to grow corn would find their way into nearby water sources if ethanol demands lead to planting more acres in corn, according to a Purdue University study.

The study of Indiana water sources found that those near fields that practice continuous-corn rotations had higher levels of nitrogen, fungicides and phosphorous than corn-soybean rotations. Results of the study by Indrajeet Chaubey, an associate professor of agricultural and biological engineering, and Bernard Engel, a professor and head of agricultural and biological engineering, were published online in the Journal of Environmental Engineering.

"When you move from corn-soybean rotations to continuous corn, the sediment losses will be much greater," Chaubey said. "Increased sediment losses allow more fungicide and phosphorous to get into the water because they move with sediment."

Nitrogen and fungicides are more heavily used in corn crops than soybeans, increasing the amounts found in the soil of continuous-corn fields. Sediment losses become more prevalent because tilling is often required in continuous-corn fields, whereas corn-soybean rotations can more easily be no-till fields, Engel said.

"The common practice is there is a lot of tillage to put corn back on top of corn," Engel said. "Any time we see changes in the landscape, there is a potential to see changes in water quality."

Chaubey said there was no significant change in the amount of atrazine detected in water near fields that changed to continuous-corn rotations. The commonly used pesticide sticks to plant material and degrades in sunlight, keeping it from reaching water through runoff or sediment.

U.S. Department of Agriculture data has shown that corn acreage has increased with the demand for ethanol, with 93 million acres in 2007, an increase of 12.1 million acres that year.

"As we look forward here, if corn stover is going to be a preferred bio-feedstock, we would see more corn acreage being planted," Engel said. "We need to know how that will affect water quality."